Integrated Molecular, Cellular and Spatial Analysis of the Mammalian Brain
CoskunLabGT
Integrated Molecular, Cellular and Spatial Analysis of the Mammalian Brain
43:44
Inferring pattern-driving intercellular flows from single-cell and spatial transcriptomics
CoskunLabGT
Inferring pattern-driving intercellular flows from single-cell and spatial transcriptomics
1:03:53
Mapping cellular interactions from spatially resolved transcriptomics data
CoskunLabGT
Mapping cellular interactions from spatially resolved transcriptomics data
54:19
Uncertainty-aware imputation of spatial transcriptomics with applications to brain aging
CoskunLabGT
Uncertainty-aware imputation of spatial transcriptomics with applications to brain aging
47:06
Spatially resolved analysis of proteins, protein complexes and mRNA by proximity sequencing
CoskunLabGT
Spatially resolved analysis of proteins, protein complexes and mRNA by proximity sequencing
51:11
Spatial Biology of Tumor Microenvironments for Clinical Biomarker Development and Therapy Prediction
CoskunLabGT
Spatial Biology of Tumor Microenvironments for Clinical Biomarker Development and Therapy Prediction
1:01:46
Illuminating transcriptomic dark matter with new spatial technologies
CoskunLabGT
Illuminating transcriptomic dark matter with new spatial technologies
52:58
Visual-language model for digital pathology and clinical decision-making
CoskunLabGT
Visual-language model for digital pathology and clinical decision-making
1:01:50
SPACEc: A Streamlined, Interactive Python Workflow for Multiplexed Image Processing and Analysis
CoskunLabGT
SPACEc: A Streamlined, Interactive Python Workflow for Multiplexed Image Processing and Analysis
51:32
MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Spatial Omics
CoskunLabGT
MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Spatial Omics
51:52
Spatial Omics Mapping of Human Brain Disorders
CoskunLabGT
Spatial Omics Mapping of Human Brain Disorders
56:41
From Bedside to Bench Using Spatial Analysis
CoskunLabGT
From Bedside to Bench Using Spatial Analysis
50:34
From Molecules to Multicell Modules: Immune-Mediated Tissue Restructuring
CoskunLabGT
From Molecules to Multicell Modules: Immune-Mediated Tissue Restructuring
53:35
Imaging-based genetic recording of developmental history
CoskunLabGT
Imaging-based genetic recording of developmental history
1:03:20
Computational approaches to mapping structure in tissues
CoskunLabGT
Computational approaches to mapping structure in tissues
1:10:25
Spying on microbial populations via transcriptome imaging
CoskunLabGT
Spying on microbial populations via transcriptome imaging
1:00:30
Finding Order in Chaos: Advancements in Tumor Heterogeneity using Spatial Proteomics
CoskunLabGT
Finding Order in Chaos: Advancements in Tumor Heterogeneity using Spatial Proteomics
1:04:09
Generating a spatial atlas of the healthy and obese liver across species
CoskunLabGT
Generating a spatial atlas of the healthy and obese liver across species
57:56
Multimodal in situ analysis of single-cell transcriptional states
CoskunLabGT
Multimodal in situ analysis of single-cell transcriptional states
1:08:03
Learning spatial components of molecular tissue biology
CoskunLabGT
Learning spatial components of molecular tissue biology
1:10:03
Level up immune profiling of the tumor microenvironment - deep phenotyping and target discovery
CoskunLabGT
Level up immune profiling of the tumor microenvironment - deep phenotyping and target discovery
1:04:29
Spatially resolved proteogenomic characterization of the tumor micro-environment in FFPE tissues
CoskunLabGT
Spatially resolved proteogenomic characterization of the tumor micro-environment in FFPE tissues
33:17
SPICEMIX: Integrative single-cell spatial modeling for inferring cell identity
CoskunLabGT
SPICEMIX: Integrative single-cell spatial modeling for inferring cell identity
52:52
Neural Network Physiology + Spatial Transcriptomics (Speaker: Jerry Chen)
CoskunLabGT
Neural Network Physiology + Spatial Transcriptomics (Speaker: Jerry Chen)
59:38
Enhanced Electric FISH (Speaker: Sten Linnarsson, Karolinska Institutet)
CoskunLabGT
Enhanced Electric FISH (Speaker: Sten Linnarsson, Karolinska Institutet)
1:11:14
High-resolution multiplexed chemical imaging in cells and tissues (Speaker: Lu Wei, Caltech)
CoskunLabGT
High-resolution multiplexed chemical imaging in cells and tissues (Speaker: Lu Wei, Caltech)
1:07:31
Integration of Single Cell Spatial Technologies enables Granular Characterization of COVID-19
CoskunLabGT
Integration of Single Cell Spatial Technologies enables Granular Characterization of COVID-19
56:55
Regulation of the immune response through microanatomy and cellular patterning
CoskunLabGT
Regulation of the immune response through microanatomy and cellular patterning
1:17:28
NanoPOTS technologies for single-cell and spatial proteomics (Speaker: Ying Zhu, PNNL)
CoskunLabGT
NanoPOTS technologies for single-cell and spatial proteomics (Speaker: Ying Zhu, PNNL)
1:07:54
Advancing Biology with Spatial Genomics (Speaker: Brian R. Fritz, Spatial Genomics)
CoskunLabGT
Advancing Biology with Spatial Genomics (Speaker: Brian R. Fritz, Spatial Genomics)
1:00:36
Multimodal Imaging Mass Spectrometry: Advanced Technologies for Molecular Mapping of Tissues
CoskunLabGT
Multimodal Imaging Mass Spectrometry: Advanced Technologies for Molecular Mapping of Tissues
55:41
Genome origami: differentiating cells by bending the blueprints (Speaker: Alistair Boettiger)
CoskunLabGT
Genome origami: differentiating cells by bending the blueprints (Speaker: Alistair Boettiger)
1:09:48
Single cell & spatial multiplex profiling of immune cell markers in FFPE tumors - RNAscope HiPlex v2
CoskunLabGT
Single cell & spatial multiplex profiling of immune cell markers in FFPE tumors - RNAscope HiPlex v2
1:04:59
Every Cell Matters! Molecular Cartography, a versatile platform for in situ mRNA quantification
CoskunLabGT
Every Cell Matters! Molecular Cartography, a versatile platform for in situ mRNA quantification
1:08:21
Versatile, high-resolution & large field-of-view single molecule imaging by oblique plane microscopy
CoskunLabGT
Versatile, high-resolution & large field-of-view single molecule imaging by oblique plane microscopy
1:00:43
Non-dissociative single-cell RNA-seq for spatial decoding of chronic pain in the brain
CoskunLabGT
Non-dissociative single-cell RNA-seq for spatial decoding of chronic pain in the brain
1:06:35
Single cell architecture of the immune microenvironment in lymphoma
CoskunLabGT
Single cell architecture of the immune microenvironment in lymphoma
1:06:57
Statistical Approaches and Computational Tools for Analyzing Spatially-Resolved Transcriptomics Data
CoskunLabGT
Statistical Approaches and Computational Tools for Analyzing Spatially-Resolved Transcriptomics Data
1:13:19
Large 3D Maps of Human Tumors at Single-Cell Resolution (Speakers: Denis Wirtz and Ashley Kiemen)
CoskunLabGT
Large 3D Maps of Human Tumors at Single-Cell Resolution (Speakers: Denis Wirtz and Ashley Kiemen)
1:03:49
Imaging the Transcriptome - Creating Tissue Atlases with MERFISH (Speaker: Jeffrey R. Moffitt)
CoskunLabGT
Imaging the Transcriptome - Creating Tissue Atlases with MERFISH (Speaker: Jeffrey R. Moffitt)
1:12:43
Comprehensive mapping of tissue architecture via integrated single cell and spatial transcriptomics
CoskunLabGT
Comprehensive mapping of tissue architecture via integrated single cell and spatial transcriptomics
1:04:44
Breaking Spatial Barriers: Introducing Visium Spatial Gene Expression for FFPE
CoskunLabGT
Breaking Spatial Barriers: Introducing Visium Spatial Gene Expression for FFPE
1:03:18
The NanoString Spatial Molecular Imager: multi-omic high-plex imaging (RNA and Protein)
CoskunLabGT
The NanoString Spatial Molecular Imager: multi-omic high-plex imaging (RNA and Protein)
1:18:04
Quantitative single-molecule, single-cell spatial data with subcellular resolution
CoskunLabGT
Quantitative single-molecule, single-cell spatial data with subcellular resolution
58:41
Spatial Transcriptomics and a Tumor Immune-Cell Atlas: steps towards precision oncology
CoskunLabGT
Spatial Transcriptomics and a Tumor Immune-Cell Atlas: steps towards precision oncology
49:50
What does RNA do on chromatin and cell surface? (Speaker: Sheng Zhong, UC San Diego)
CoskunLabGT
What does RNA do on chromatin and cell surface? (Speaker: Sheng Zhong, UC San Diego)
1:16:09
Imaging the spatial distribution of metabolites, lipids, and cell types in human and mouse liver
CoskunLabGT
Imaging the spatial distribution of metabolites, lipids, and cell types in human and mouse liver
52:08
Computational Tools for Understanding Cell-Cell communication (Speaker: Kai Tan)
CoskunLabGT
Computational Tools for Understanding Cell-Cell communication (Speaker: Kai Tan)
43:07
Next generation tools for spatial and temporal genomics (Speaker: Fei Chen, Broad Institute)
CoskunLabGT
Next generation tools for spatial and temporal genomics (Speaker: Fei Chen, Broad Institute)
1:02:17
Mapping the inner world of cells (Speaker: Bo Huang, UCSF)
CoskunLabGT
Mapping the inner world of cells (Speaker: Bo Huang, UCSF)
1:10:49
Beyond transcriptomics: Integrating structural organization with gene expression
CoskunLabGT
Beyond transcriptomics: Integrating structural organization with gene expression
58:02
The way toward building a comprehensive human tumor atlas with multiplexed imaging
CoskunLabGT
The way toward building a comprehensive human tumor atlas with multiplexed imaging
55:07
Decoding tissue complexity in cancer and COVID using multiplex single cell resolution imaging
CoskunLabGT
Decoding tissue complexity in cancer and COVID using multiplex single cell resolution imaging
56:05
Spatiotemporal subcellular dissection of the human proteome (Speaker: Emma Lundberg, Sci Life Lab)
CoskunLabGT
Spatiotemporal subcellular dissection of the human proteome (Speaker: Emma Lundberg, Sci Life Lab)
58:33
Single-cell Biology in a Software 2.0 World (Speaker: David Van Valen, Caltech)
CoskunLabGT
Single-cell Biology in a Software 2.0 World (Speaker: David Van Valen, Caltech)
1:29:24
Characterizing the cellular and molecular diversity of human tissue by targeted in situ sequencing
CoskunLabGT
Characterizing the cellular and molecular diversity of human tissue by targeted in situ sequencing
58:05
Why are not all cells the same? On cell states, expression noise, and spatial information
CoskunLabGT
Why are not all cells the same? On cell states, expression noise, and spatial information
1:07:25
Spatially Resolve Whole Transcriptome Data with High Resolution & Morphological Context Using Visium
CoskunLabGT
Spatially Resolve Whole Transcriptome Data with High Resolution & Morphological Context Using Visium
1:04:43
Comparative immunology in triple negative breast cancer and human TB using MIBI
CoskunLabGT
Comparative immunology in triple negative breast cancer and human TB using MIBI
1:06:19
Lattice light sheet microscopy: Innovations, applications and future directions
CoskunLabGT
Lattice light sheet microscopy: Innovations, applications and future directions
1:01:57
Unbiased high-plex spatially resolved multi-omic characterization of FFPE tissues
CoskunLabGT
Unbiased high-plex spatially resolved multi-omic characterization of FFPE tissues
1:12:51
Multiscale analysis of in situ tumor biology towards precision medicine
CoskunLabGT
Multiscale analysis of in situ tumor biology towards precision medicine
1:06:01
Spatial metabolomics in tissues and single cells (Speaker: Theodore Alexandrov, EMBL)
CoskunLabGT
Spatial metabolomics in tissues and single cells (Speaker: Theodore Alexandrov, EMBL)
1:03:43
Unwrapping layers of tissue complexity with CODEX Immunofluorescence imaging
CoskunLabGT
Unwrapping layers of tissue complexity with CODEX Immunofluorescence imaging
1:04:07
Illuminate biology with with spatially resolved, single cell transcriptomics (Jiang He, Vizgen)
CoskunLabGT
Illuminate biology with with spatially resolved, single cell transcriptomics (Jiang He, Vizgen)
1:04:33
A unified framework to analyze spatial expression data (Speaker: Ruben Dries, BU)
CoskunLabGT
A unified framework to analyze spatial expression data (Speaker: Ruben Dries, BU)
54:58
Spatial division of labor in mammalian tissues (Speaker: Andreas Moor, ETH Zurich)
CoskunLabGT
Spatial division of labor in mammalian tissues (Speaker: Andreas Moor, ETH Zurich)
55:56
Spatial mapping of microbiomes and developing tissues (Speaker: Iwijn De Vlaminck, Cornell Univ)
CoskunLabGT
Spatial mapping of microbiomes and developing tissues (Speaker: Iwijn De Vlaminck, Cornell Univ)
1:06:19
Predicting cancer immunotherapy response by CODEX highly multiplexed tumor imaging
CoskunLabGT
Predicting cancer immunotherapy response by CODEX highly multiplexed tumor imaging
1:08:02
Spatial single-cell functional genomics and cell decision-making
CoskunLabGT
Spatial single-cell functional genomics and cell decision-making
1:09:14
Oligo-based technologies for visualizing nucleic acids in single cells (Speaker: Brian Beliveau, UW)
CoskunLabGT
Oligo-based technologies for visualizing nucleic acids in single cells (Speaker: Brian Beliveau, UW)
1:04:24
Spatio-genetic imaging with DNA microscopy (Speaker: Joshua Weinstein, University of Chicago)
CoskunLabGT
Spatio-genetic imaging with DNA microscopy (Speaker: Joshua Weinstein, University of Chicago)
1:04:20
Spatially Resolved Multi-Modal Analysis of Neurodegenerative disease (Silas Maniatis, NY Genome)
CoskunLabGT
Spatially Resolved Multi-Modal Analysis of Neurodegenerative disease (Silas Maniatis, NY Genome)
1:01:17
Repurposing DNA for Microscopy (Speaker: Sinem Saka, Harvard University)
CoskunLabGT
Repurposing DNA for Microscopy (Speaker: Sinem Saka, Harvard University)
1:02:18
Visualizing Metabolism in Cell and Animals with Vibrational Imaging (Speaker: Lingyan Shi, UCSD)
CoskunLabGT
Visualizing Metabolism in Cell and Animals with Vibrational Imaging (Speaker: Lingyan Shi, UCSD)
1:00:29
Light microscopy of proteins in their ultra-structural context
CoskunLabGT
Light microscopy of proteins in their ultra-structural context
41:38
Single-Cell Transcriptomic Analysis of mIHC Images via Antigen Mapping
CoskunLabGT
Single-Cell Transcriptomic Analysis of mIHC Images via Antigen Mapping
48:50
Applying single cell and spatial omics approaches to HIV research
CoskunLabGT
Applying single cell and spatial omics approaches to HIV research
54:38
High-spatial-resolution multiomics sequencing of mouse embryos via DBiT-seq
CoskunLabGT
High-spatial-resolution multiomics sequencing of mouse embryos via DBiT-seq
58:18
Multiplexed imaging of nucleome architectures in single cells of mammalian tissue
CoskunLabGT
Multiplexed imaging of nucleome architectures in single cells of mammalian tissue
59:39
NGS-Based Spatial Omics Technologies (Speaker: Rong Fan, Yale University)
CoskunLabGT
NGS-Based Spatial Omics Technologies (Speaker: Rong Fan, Yale University)
1:09:53
Coskun Lab GT: Spatial Multi-Omics for Precision Medicine
CoskunLabGT
Coskun Lab GT: Spatial Multi-Omics for Precision Medicine
1:28
Image-based spatial omics I: Spatial Transcriptomics
CoskunLabGT
Image-based spatial omics I: Spatial Transcriptomics
1:01:13
Digital posters for interactive cellular media and bioengineering education
CoskunLabGT
Digital posters for interactive cellular media and bioengineering education
0:58